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IntaRNA 3.4.1
RNA-RNA interaction prediction | C++ API
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This is the complete list of members for IntaRNA::HelixHandler, including all inherited members.
| fillHelix(const size_t i1, const size_t j1, const size_t i2, const size_t j2)=0 | IntaRNA::HelixHandler | pure virtual |
| fillHelixSeed(const size_t i1, const size_t j1, const size_t i2, const size_t j2)=0 | IntaRNA::HelixHandler | pure virtual |
| getConstraint() const =0 | IntaRNA::HelixHandler | pure virtual |
| getHelixE(const size_t i1, const size_t i2) const =0 | IntaRNA::HelixHandler | pure virtual |
| getHelixHandler(const InteractionEnergy &energy, const HelixConstraint &helixConstraint, SeedHandler *const seedHandler=NULL) | IntaRNA::HelixHandler | static |
| getHelixLength1(const size_t i1, const size_t i2) const =0 | IntaRNA::HelixHandler | pure virtual |
| getHelixLength2(const size_t i1, const size_t i2) const =0 | IntaRNA::HelixHandler | pure virtual |
| getHelixSeedE(const size_t i1, const size_t i2) const =0 | IntaRNA::HelixHandler | pure virtual |
| getHelixSeedLength1(const size_t i1, const size_t i2) const =0 | IntaRNA::HelixHandler | pure virtual |
| getHelixSeedLength2(const size_t i1, const size_t i2) const =0 | IntaRNA::HelixHandler | pure virtual |
| getInteractionEnergy() const =0 | IntaRNA::HelixHandler | pure virtual |
| HelixHandler() | IntaRNA::HelixHandler | inline |
| setSeedHandler(SeedHandler &seedHandler)=0 | IntaRNA::HelixHandler | pure virtual |
| traceBackHelix(Interaction &interaction, const size_t i1, const size_t i2)=0 | IntaRNA::HelixHandler | pure virtual |
| traceBackHelixSeed(Interaction &interaction, const size_t i1, const size_t i2)=0 | IntaRNA::HelixHandler | pure virtual |
| ~HelixHandler() | IntaRNA::HelixHandler | inlinevirtual |
1.9.8