IntaRNA 3.4.1
RNA-RNA interaction prediction | C++ API
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IntaRNA::OutputHandlerSeedCandidates Member List

This is the complete list of members for IntaRNA::OutputHandlerSeedCandidates, including all inherited members.

add(const Interaction &interaction) overrideIntaRNA::OutputHandlerSeedCandidatesvirtual
addSeed(const Interaction::BasePair &seed, const Interaction &interaction)IntaRNA::OutputHandlerSeedCandidates
clear()IntaRNA::OutputHandlerSeedCandidates
exactPartitionIntaRNA::OutputHandlerprotected
getOutputConstraint() constIntaRNA::OutputHandlerinline
getZ() constIntaRNA::OutputHandlerinlinevirtual
hasNonzeroZ() constIntaRNA::OutputHandlerinline
incrementZ(const Z_type subZ)IntaRNA::OutputHandlerinlinevirtual
outConstraintIntaRNA::OutputHandlerprotected
OutputHandler(const OutputConstraint &outConstraint)IntaRNA::OutputHandlerinline
OutputHandlerSeedCandidates(const OutputConstraint &constraint)IntaRNA::OutputHandlerSeedCandidatesexplicit
report(OutputHandler &destination) constIntaRNA::OutputHandlerSeedCandidates
reported() constIntaRNA::OutputHandlerinlinevirtual
reportedInteractionsIntaRNA::OutputHandlerprotected
reverse(const std::string &str)IntaRNA::OutputHandlerinlinestatic
setExactPartition(bool exact)IntaRNA::OutputHandlerinlinevirtual
usesExactPartition() constIntaRNA::OutputHandlerinline
ZIntaRNA::OutputHandlerprotected
~OutputHandler()IntaRNA::OutputHandlerinlinevirtual
Backofen Lab University of Freiburg · IntaRNA C++ API
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