vaRRI-js — RNA-RNA Interaction Visualiser

Input

Example

Sequence (IUPAC; separate two molecules with &)

Start 1 Start 2

Structure (dot-bracket; separate two molecules with &)

Coloring

Nucleotide highlighting

Background highlighting

Show G-U basepairs as dashed lines

Highlight subseq in mol. 1 (e.g. 3-8 or 3-8,15-20)

Highlight subseq in mol. 2 (e.g. 2-5)

Enable Fornac force-layout animation

Rotate Crop: 0

Sequence 1 (strand)

Sequence 2 (strand)

Base pair

Subsequence highlight

Nucleotide highlight

Background highlight

Export: