IntaRNA 3.4.1
RNA-RNA interaction prediction | C++ API
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OutputHandlerEnsemble.h
Go to the documentation of this file.
1
2#ifndef INTARNA_OUTPUTHANDLERENSEMBLE_H_
3#define INTARNA_OUTPUTHANDLERENSEMBLE_H_
4
8
9#include <iostream>
10
11namespace IntaRNA {
12
20public:
21
31 , std::ostream & out
33 );
34
41
48 virtual
49 void
50 add( const Interaction & interaction );
51
52protected:
53
56
58 using OutputHandler::Z;
59
61 std::ostream & out;
62
65
66};
67
68
70
71} // namespace
72
73#endif /* INTARNA_OUTPUTHANDLERENSEMBLE_H_ */
Definition InteractionEnergy.h:20
Definition Interaction.h:28
Definition OutputConstraint.h:19
Definition OutputHandlerEnsemble.h:19
OutputHandlerEnsemble(const OutputConstraint &outConstraint, std::ostream &out, const InteractionEnergy &energy)
std::ostream & out
the output stream to write the ensemble information to
Definition OutputHandlerEnsemble.h:61
virtual void add(const Interaction &interaction)
const InteractionEnergy & energy
the interaction energy handler used for the energy computations
Definition OutputHandlerEnsemble.h:64
Definition OutputHandler.h:20
const OutputConstraint outConstraint
the output constraints to be applied
Definition OutputHandler.h:103
Z_type Z
overall partition function for the sequences provided in Z_energy
Definition OutputHandler.h:109
size_t reportedInteractions
number of reported interactions
Definition OutputHandler.h:106
Definition Accessibility.h:13