IntaRNA Directory Reference

Directory dependency graph for IntaRNA:

Files
	Accessibility.h
	AccessibilityArchive.h
	AccessibilityBasePair.h
	AccessibilityConstraint.h
	AccessibilityDisabled.h
	AccessibilityFromStream.h
	AccessibilityVrna.h
	general.h
	HelixConstraint.h
	HelixHandler.h
	HelixHandlerIdxOffset.h
	HelixHandlerNoBulgeMax.h
	HelixHandlerUnpaired.h
	IndexRange.h
	IndexRangeList.h
	Interaction.h
	InteractionEnergy.h
	InteractionEnergyBasePair.h
	InteractionEnergyIdxOffset.h
	InteractionEnergyVrna.h
	InteractionRange.h
	Matrix.h
	NussinovHandler.h
	OutputConstraint.h
	OutputHandler.h
	OutputHandlerCsv.h
	OutputHandlerEnsemble.h
	OutputHandlerHub.h
	OutputHandlerInteractionList.h
	OutputHandlerText.h
	OutputStreamHandler.h
	OutputStreamHandlerSortedCsv.h
	PredictionTracker.h
	PredictionTrackerHub.h
	PredictionTrackerPairMinE.h
	PredictionTrackerProfileMinE.h
	PredictionTrackerProfileSpotProb.h
	PredictionTrackerSpotProb.h
	PredictionTrackerSpotProbAll.h
	Predictor.h
	PredictorEvalOnly.h
	PredictorMfe.h
	PredictorMfe2d.h
	PredictorMfe2dHelixBlockHeuristic.h
	PredictorMfe2dHelixBlockHeuristicSeed.h
	PredictorMfe2dHeuristic.h
	PredictorMfe2dHeuristicSeed.h
	PredictorMfe2dHeuristicSeedExtension.h
	PredictorMfe2dSeed.h
	PredictorMfe2dSeedExtension.h
	PredictorMfe2dSeedExtensionRIblast.h
	PredictorMfeEns.h
	PredictorMfeEns2d.h
	PredictorMfeEns2dHeuristic.h
	PredictorMfeEns2dHeuristicSeedExtension.h
	PredictorMfeEns2dSeedExtension.h
	PredictorMfeEnsSeedOnly.h
	PredictorMfeSeedOnly.h
	PredictorSeedExtensionKinetic.h
	ReverseAccessibility.h
	RnaSequence.h
	SeedConstraint.h
	SeedHandler.h
	SeedHandlerExplicit.h
	SeedHandlerIdxOffset.h
	SeedHandlerMfe.h
	SeedHandlerNoBulge.h
	VrnaHandler.h