OutputHandlerInteractionList.h

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#ifndef OUTPUTHANDLERINTERACTIONLIST_H_
#define OUTPUTHANDLERINTERACTIONLIST_H_
 
#include "OutputHandler.h"
 
#include <list>
 
namespace IntaRNA
{
 
class OutputHandlerInteractionList: public OutputHandler
{
protected:
 
    typedef std::list<Interaction*> StorageContainer;
 
public:
 
    typedef StorageContainer::const_iterator const_iterator;
    typedef StorageContainer::iterator iterator;
 
public:
 
    OutputHandlerInteractionList( const OutputConstraint & outConstraint
                                , const size_t maxToStore);
 
    virtual ~OutputHandlerInteractionList();
 
    virtual
    void
    add( const Interaction & interaction );
 
    bool empty() const;
 
    const_iterator begin() const;
 
    const_iterator end() const;
 
    iterator begin();
 
    iterator end();
 
protected:
 
    using OutputHandler::reportedInteractions;
 
    StorageContainer storage;
 
    const size_t maxToStore;
 
    static
    bool lessThan_StorageContainer( const Interaction * const a
            , const Interaction * const b )
        { return *a < *b; }
};
 
 
inline
bool
OutputHandlerInteractionList::
empty() const {
    return storage.empty();
}
 
 
inline
OutputHandlerInteractionList::
const_iterator
OutputHandlerInteractionList::
begin() const {
    return storage.begin();
}
 
 
inline
OutputHandlerInteractionList::
const_iterator
OutputHandlerInteractionList::
end() const {
    return storage.end();
}
 
 
inline
OutputHandlerInteractionList::
iterator
OutputHandlerInteractionList::
begin() {
    return storage.begin();
}
 
 
inline
OutputHandlerInteractionList::
iterator
OutputHandlerInteractionList::
end() {
    return storage.end();
}
 
 
 
 
} /* namespace IntaRNA */
 
#endif /* OUTPUTHANDLERINTERACTIONLIST_H_ */