IntaRNA::PredictorMfe::BestInteraction< ValueType > Class Template Reference

#include <PredictorMfe.h>

Public Member Functions
	BestInteraction (const ValueType val=(std::numeric_limits< ValueType >::has_infinity ? std::numeric_limits< ValueType >::infinity() :std::numeric_limits< ValueType >::max()), const size_t j1=RnaSequence::lastPos, const size_t j2=RnaSequence::lastPos)

Public Attributes
ValueType	val
	value to be stored for the interaction, e.g. energy
size_t	j1
	right end of the interaction in seq1
size_t	j2
	right end of the interaction in seq2

Detailed Description

template<class ValueType>
class IntaRNA::PredictorMfe::BestInteraction< ValueType >

Describes the currently best interaction found for a left interaction boundary i1,i2

Constructor & Destructor Documentation

BestInteraction()

template<class ValueType >

IntaRNA::PredictorMfe::BestInteraction< ValueType >::BestInteraction ( const ValueType  val = (std::numeric_limits<ValueType>::has_infinity ? std::numeric_limits<ValueType>::infinity() : std::numeric_limits<ValueType>::max()), const size_t  j1 = RnaSequence::lastPos, const size_t  j2 = RnaSequence::lastPos  )

inline

Init object

Parameters

val	the value to be stored (default = INF [or MAX if not supported])
j1	first index
j1	second index

Member Data Documentation

j1

template<class ValueType >

size_t IntaRNA::PredictorMfe::BestInteraction< ValueType >::j1

right end of the interaction in seq1

j2

template<class ValueType >

size_t IntaRNA::PredictorMfe::BestInteraction< ValueType >::j2

right end of the interaction in seq2

val

template<class ValueType >

ValueType IntaRNA::PredictorMfe::BestInteraction< ValueType >::val

value to be stored for the interaction, e.g. energy

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The documentation for this class was generated from the following file:

• src/IntaRNA/PredictorMfe.h